COMBINATION OF LABEL-FREE SURFACE-ENHACED RAMAN SPECTROSCOPY WITH CONVOLUTIONAL NEURAL NETWORK FOR DNA RECOGNITION

1 SKVORTSOVA Anastasia
Co-authors:
1 TRELIN Andrei 1 SVORCIK Vaclav 1 GUSELNIKOVA Olga 1 LYUTAKOV Oleksyi
Institution:
1 UCT - University of Chemistry and Technology, Prague, Czech Republic, EU, skvortss@vscht.cz
Conference:
12th International Conference on Nanomaterials - Research & Application, Brno, Czech Republic, EU, October 21 - 23, 2020
Proceedings:
Proceedings 12th International Conference on Nanomaterials - Research & Application
Pages:
361-365
ISBN:
978-80-87294-98-7
ISSN:
2694-930X
Published:
28th December 2020
Proceedings of the conference were published in Web of Science and Scopus.
Metrics:
750 views / 453 downloads
Abstract

Nowadays, the rapid identification of bacterial antibiotic resistance is one of the major biomedical challenges. Classical methods of detection (culture and sensitivity testing, microbial whole-genome sequencing) fail in the context of time requirements. In this work, we propose the express method for the detection of gene encoding enzyme responsible for bacterial antibiotic resistance. Proposed analytical approach is based on a combination of unique advantages provided by surface enhanced Raman spectroscopy (SERS) and artificially created convolutional neural network (CNN). SERS is known for the extremely high sensitivity and fast analysis, while CNN seems to be a promising alternative to find even ambiguous spectral properties produced by the Raman signal.

Keywords: SERS, DNA, neural networks, CNN, antibiotic resistance

© This is an open access article distributed under the Creative Commons Attribution License which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Scroll to Top